Introduction
SiNVICT is designed to detect SNVs and short indels from cell-free/circulating tumor DNA sequencing data.
Currently Supported Features:
- Multi-Sample and Single-Sample SNV and short indel calling
- Read depth filtering
- Strand bias filtering
- Homopolymer region filtering
- Signal-to-Noise ratio filtering
- Time-Series Analysis for samples sequenced from the same patient in multiple time points
Publications
Usage
To download and use SiNVICT please use the side links.
Support
Feel free to send your inquiries to @ckockan or @fhach
Bug Reports
To report any bugs or issues please refer to the issues page.
Developers
SiNVICT is brought to you by: - Can Kockan @ckockan - Faraz Hach @fhach
From the Lab for Computational Biology at Simon Fraser University